C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: paired box gene 3a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000010192 pax3a 7955 + 2:47581097-47641979 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000014350 pax3a-201 47581097-47641979 protein_coding
  ENSDART00000038828 pax3a-001 47581097-47633036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000014350ENSDART00000038828
Transcript ID Brain Heart Kidney Muscle
ENSDART00000014350 0.429±0.07 N/A 0.037±0.00 0.067±0.00
ENSDART00000038828 0.087±0.04 0.173±0.11 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001755 IMP neural crest cell migration
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0043565 IEA sequence-specific DNA binding
GO:0048066 IMP developmental pigmentation
GO:0048484 IMP enteric nervous system development
GO:0050936 IMP xanthophore differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000135903 PAX3 paired box 3 protein_coding Homo_sapiens
ENSMUSG00000004872 Pax3 paired box 3 protein_coding Mus_musculus

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