C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paired box gene 3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000038828 pax3a-001 ENSDARG00000010192 7955 + 2:47581097-47633036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartENSDART00000038828
Transcript ID Brain Heart
ENSDART00000038828 0.087±0.04 0.173±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001755 IMP neural crest cell migration
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0043565 IEA sequence-specific DNA binding
GO:0048066 IMP developmental pigmentation
GO:0048484 IMP enteric nervous system development
GO:0050936 IMP xanthophore differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030508 Pax7-001 protein_coding Mus_musculus 0 411
ENSMUST00000174681 Pax7-002 protein_coding Mus_musculus 0 383

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