C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: par-3 partitioning defective 3 homolog (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000010583 pard3 7955 + 2:43306095-43490366 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000018729 pard3-002 43306095-43431177 protein_coding
  ENSDART00000056402 pard3-003 43306139-43430816 protein_coding
  ENSDART00000129134 pard3-001 43306095-43490366 protein_coding
  ENSDART00000131718 pard3-004 43380719-43404200 processed_transcript

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000018729ENSDART00000056402ENSDART00000129134
Transcript ID Brain Heart Kidney Muscle
ENSDART00000018729 0.534±0.00 0.741±0.00 N/A N/A
ENSDART00000056402 1.572±0.00 N/A N/A N/A
ENSDART00000129134 0.458±0.13 1.017±0.56 0.541±0.00 0.366±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CM CIL_0000CM_0001 CGP 2:43306095-43633838

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0007405 IMP neuroblast proliferation
GO:0016324 IDA apical plasma membrane
GO:0021535 IMP cell migration in hindbrain
GO:0043010 IMP camera-type eye development
GO:0045197 IMP establishment or maintenance of epithelial cell apical/basal polarity
GO:0048048 IMP embryonic eye morphogenesis
GO:0051660 IMP establishment of centrosome localization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000148498 PARD3 par-3 family cell polarity regulator protein_coding Homo_sapiens
ENSMUSG00000025812 Pard3 par-3 family cell polarity regulator protein_coding Mus_musculus

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