C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily M, member 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000011259 trpm1a 7955 - 7:30648884-30677872 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000052584 trpm1a-201 30648884-30676267 protein_coding
  ENSDART00000086664 trpm1a-202 30672765-30677743 protein_coding
  ENSDART00000140938 trpm1a-001 30672764-30677741 protein_coding
  ENSDART00000147251 trpm1a-002 30673698-30677872 protein_coding
  ENSDART00000147919 trpm1a-003 30650630-30676939 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000052584ENSDART00000086664ENSDART00000140938ENSDART00000147251ENSDART00000147919
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000052584 0.137±0.02 0.127±0.00 0.045±0.00 0.007±0.00 0.041±0.00
ENSDART00000086664 N/A 0.987±0.65 N/A N/A N/A
ENSDART00000140938 0.104±0.00 0.455±0.00 N/A N/A N/A
ENSDART00000147251 N/A N/A N/A N/A 0.165±0.00
ENSDART00000147919 N/A N/A 0.296±0.01 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000134160 TRPM1 transient receptor potential cation channel, subfamily M, member 1 protein_coding Homo_sapiens
ENSMUSG00000030523 Trpm1 transient receptor potential cation channel, subfamily M, member 1 protein_coding Mus_musculus

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