C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily M, member 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000052584 trpm1a-201 ENSDARG00000011259 7955 - 7:30648884-30676267 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000052584
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000052584 0.137±0.02 0.127±0.00 0.045±0.00 0.007±0.00 0.041±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037901 Trpm3-201 protein_coding Mus_musculus 0 366
ENSMUST00000074770 Trpm3-202 protein_coding Mus_musculus 0 309
ENSMUST00000087576 Trpm3-203 protein_coding Mus_musculus 0 366
ENSMUST00000099564 Trpm3-204 protein_coding Mus_musculus 0 309
ENSMUST00000099569 Trpm3-206 protein_coding Mus_musculus 0 416
ENST00000357533 TRPM3-014 protein_coding Homo_sapiens 0 353
ENST00000358082 TRPM3-015 protein_coding Homo_sapiens 0 353
ENST00000360823 TRPM3-201 protein_coding Homo_sapiens 0 353
ENST00000377105 TRPM3-202 protein_coding Homo_sapiens 0 399
ENST00000377110 TRPM3-008 protein_coding Homo_sapiens 0 438
ENST00000377111 TRPM3-007 protein_coding Homo_sapiens 0 438
ENST00000396280 TRPM3-012 protein_coding Homo_sapiens 0 353
ENST00000396285 TRPM3-009 protein_coding Homo_sapiens 0 438
ENST00000396292 TRPM3-011 protein_coding Homo_sapiens 0 438
ENST00000408909 TRPM3-016 protein_coding Homo_sapiens 0 399

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