C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sarcoglycan, epsilon
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000012138 sgce 7955 - 19:41999294-42030199 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000102807 sgce-201 41999298-42030088 protein_coding
  ENSDART00000111982 sgce-001 41999294-42030199 protein_coding
  ENSDART00000131865 sgce-002 41999294-42012866 protein_coding
  ENSDART00000151120 sgce-003 41999298-42013034 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000102807ENSDART00000111982ENSDART00000131865ENSDART00000151120
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000102807 46.636±19.21 N/A N/A N/A N/A
ENSDART00000111982 20.717±9.06 39.956±5.56 3.476±0.00 0.218±0.00 5.466±0.00
ENSDART00000131865 80.848±8.53 N/A N/A N/A N/A
ENSDART00000151120 13.404±0.00 37.891±17.94 2.055±0.00 0.301±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SP CIL_0004SP_0001 CGP 19:41967601-42030199

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0008150 ND biological_process
GO:0016012 IEA sarcoglycan complex
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000127990 SGCE sarcoglycan, epsilon protein_coding Homo_sapiens
ENSMUSG00000004631 Sgce sarcoglycan, epsilon protein_coding Mus_musculus

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