C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen type XI alpha-2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000012422 col11a2 7955 - 19:7802938-7847742 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000033363 col11a2-001 7803456-7847726 protein_coding
  ENSDART00000104799 col11a2-201 7802938-7847643 protein_coding
  ENSDART00000105754 col11a2-202 7802941-7847337 protein_coding
  ENSDART00000128331 col11a2-003 7828432-7847742 protein_coding
  ENSDART00000133179 col11a2-002 7803824-7847596 protein_coding
  ENSDART00000151138 col11a2-004 7802938-7847643 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000033363ENSDART00000128331ENSDART00000133179ENSDART00000151138
Transcript ID Brain Heart Liver Muscle
ENSDART00000033363 N/A 0.052±0.00 N/A 0.033±0.00
ENSDART00000128331 N/A N/A 0.043±0.00 N/A
ENSDART00000133179 N/A 0.049±0.00 0.019±0.00 N/A
ENSDART00000151138 0.098±0.05 0.159±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PH CIL_0001PH_0001 CGP 19:7802938-7897380

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005581 IEA collagen
GO:0060536 IMP cartilage morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000204248 COL11A2 collagen, type XI, alpha 2 protein_coding Homo_sapiens
ENSMUSG00000024330 Col11a2 collagen, type XI, alpha 2 protein_coding Mus_musculus

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