C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (RNA) II (DNA directed) polypeptide B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000012592 polr2b 7955 + 14:53570632-53597284 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000041408 polr2b-001 53571064-53584023 protein_coding
  ENSDART00000124865 polr2b-201 53571142-53597284 protein_coding
  ENSDART00000128452 polr2b-002 53571053-53579672 protein_coding
  ENSDART00000131815 polr2b-003 53570632-53573694 processed_transcript
  ENSDART00000137204 polr2b-004 53573741-53581216 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000124865
Transcript ID Brain Heart Liver Muscle
ENSDART00000124865 16.290±0.00 10.605±0.00 4.675±0.00 13.169±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EC CIL_0003EC_0001 CGP 14:53551088-53570830
CIL_0003E8 CIL_0003E8_0001 CGP 14:53561275-53597284

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001055 IBA RNA polymerase II activity
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005665 IBA DNA-directed RNA polymerase II, core complex
GO:0006351 IEA transcription, DNA-templated
GO:0016740 IEA transferase activity
GO:0016779 IEA nucleotidyltransferase activity
GO:0032549 IEA ribonucleoside binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000047315 POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa protein_coding Homo_sapiens
ENSMUSG00000029250 Polr2b polymerase (RNA) II (DNA directed) polypeptide B protein_coding Mus_musculus

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