C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003EC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007222-ENSDARG00000073788 CGP 7955 14:53551088-53570830
GeneTranscriptPositionBiotype
ENSDARG00000007222 (rest)
RE1-silencing transcription factor 		ENSDART00000018955 (rest-001) 53551088-53557593 protein_coding
ENSDARG00000073788 (noa1)
nitric oxide associated 1 		ENSDART00000088520 (noa1-001) 53561275-53570830 protein_coding
ENSDART00000137901 (noa1-002) 53565014-53568455 processed_transcript
CIL_0003EC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000084093-ENSG00000084092 CGP 9606 4:56907876-56978823
GeneTranscriptPositionBiotype
ENSG00000047315 (POLR2B)
polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 		ENST00000314595 (POLR2B-201) 56978943-57031168 protein_coding
ENST00000381227 (POLR2B-001) 56977742-57031158 protein_coding
ENST00000431623 (POLR2B-014) 56978864-57031158 protein_coding
ENST00000433463 (POLR2B-005) 56978896-56990906 protein_coding
ENST00000441246 (POLR2B-006) 56978869-57031007 protein_coding
ENST00000450656 (POLR2B-003) 56977722-56990847 protein_coding
ENST00000464918 (POLR2B-010) 57023227-57023751 retained_intron
ENST00000478188 (POLR2B-002) 57009559-57031158 retained_intron
ENST00000484821 (POLR2B-011) 57023491-57024962 retained_intron
ENST00000495311 (POLR2B-004) 56977782-56978961 retained_intron
ENST00000497845 (POLR2B-007) 56978904-56986803 retained_intron
ENST00000510355 (POLR2B-008) 57010173-57015658 processed_transcript
ENSG00000084092 (NOA1)
nitric oxide associated 1 		ENST00000264230 (NOA1-001) 56963370-56978823 protein_coding
ENSG00000084093 (REST)
RE1-silencing transcription factor 		ENST00000309042 (REST-001) 56907909-56935844 protein_coding
ENST00000503522 (REST-003) 56909190-56910688 processed_transcript
ENST00000511065 (REST-002) 56908913-56911015 retained_intron
ENST00000514063 (REST-004) 56911212-56929959 processed_transcript
ENST00000611211 (REST-201) 56909016-56929878 protein_coding
ENST00000612429 (REST-202) 56907876-56922378 protein_coding
ENST00000616975 (REST-203) 56907876-56927655 protein_coding
ENST00000619101 (REST-204) 56908913-56935836 protein_coding
ENST00000622863 (REST-205) 56908094-56932184 protein_coding
ENSG00000269949 (RP11-738E22.3)
 ENST00000602820 (RP11-738E22.3-001) 56960927-56961373 lincRNA
CIL_0003EC_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029249-ENSMUSG00000036285 CGP 10090 5:77265491-77310084
GeneTranscriptPositionBiotype
ENSMUSG00000029249 (Rest)
RE1-silencing transcription factor 		ENSMUST00000080359 (Rest-001) 77265491-77286432 protein_coding
ENSMUST00000113449 (Rest-002) 77266196-77286432 protein_coding
ENSMUSG00000036285 (Noa1)
nitric oxide associated 1 		ENSMUST00000047860 (Noa1-001) 77294182-77310084 protein_coding
ENSMUST00000139435 (Noa1-004) 77305607-77307643 processed_transcript
ENSMUST00000150451 (Noa1-003) 77303379-77304315 processed_transcript
ENSMUST00000150722 (Noa1-002) 77304980-77310059 retained_intron
ENSMUSG00000093061 (Mir5098)
microRNA 5098 		ENSMUST00000175320 (Mir5098-201) 77272757-77272838 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EC_0001ENSDARG00000007222ENSDART00000018955ENSDARG00000073788ENSDART00000088520ENSDART00000137901CIL_0003EC_0002ENSG00000047315ENST00000314595ENST00000381227ENST00000431623ENST00000433463ENST00000441246ENST00000450656ENST00000464918ENST00000478188ENST00000484821ENST00000495311ENST00000497845ENST00000510355ENSG00000084092ENST00000264230ENSG00000084093ENST00000309042ENST00000503522ENST00000511065ENST00000514063ENST00000611211ENST00000612429ENST00000616975ENST00000619101ENST00000622863ENSG00000269949ENST00000602820CIL_0003EC_0003ENSMUSG00000029249ENSMUST00000080359ENSMUST00000113449ENSMUSG00000036285ENSMUST00000047860ENSMUST00000139435ENSMUST00000150451ENSMUST00000150722ENSMUSG00000093061ENSMUST00000175320
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EC_0001ENSDARG00000007222ENSDART00000018955ENSDARG00000073788ENSDART00000088520CIL_0003EC_0002ENSG00000047315ENST00000314595ENST00000381227ENST00000431623ENST00000441246ENST00000464918ENST00000510355ENSG00000084092ENST00000264230ENSG00000084093ENST00000309042ENST00000611211ENST00000616975ENST00000619101ENSG00000269949ENST00000602820CIL_0003EC_0003ENSMUSG00000029249ENSMUST00000080359ENSMUST00000113449ENSMUSG00000036285ENSMUST00000047860ENSMUST00000150451ENSMUST00000150722ENSMUSG00000093061ENSMUST00000175320
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007222 ENSDART00000018955 N/A N/A N/A 1.280±0.00 N/A N/A 5.244±0.00 5.957±0.00 1.686±0.00 N/A 1.810±0.00 N/A N/A N/A
ENSDARG00000073788 ENSDART00000088520 N/A N/A N/A 4.553±0.49 N/A N/A 1.382±0.00 1.439±0.00 1.097±0.00 N/A 4.050±0.00 N/A N/A N/A
ENSDART00000137901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000047315 ENST00000314595 N/A N/A N/A N/A N/A N/A 5.093±0.00 7.374±0.00 N/A N/A N/A 14.122±1.99 11.731±1.19 7.975±0.00
ENST00000381227 N/A N/A 6.213±0.00 N/A 8.872±0.00 N/A N/A N/A 8.598±0.00 13.464±0.00 N/A N/A N/A N/A
ENST00000431623 N/A N/A N/A 8.296±0.00 N/A N/A 5.186±0.00 N/A N/A N/A N/A N/A N/A 8.077±0.00
ENST00000433463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441246 12.665±0.00 N/A N/A 17.999±0.00 14.781±0.00 N/A 19.147±0.00 N/A 7.920±0.00 N/A 17.595±0.00 N/A N/A N/A
ENST00000450656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 89.608±0.00 75.951±0.00 100.598±0.00
ENST00000478188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 54.278±0.00 50.335±0.00 68.650±0.00
ENSG00000084092 ENST00000264230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.001±0.00 N/A N/A N/A
ENSG00000084093 ENST00000309042 2.728±0.00 1.390±0.00 1.540±0.00 0.275±0.05 3.136±0.00 1.453±0.38 1.964±0.36 1.104±0.44 1.150±0.00 1.328±0.34 1.000±0.77 2.347±0.46 N/A 2.833±0.00
ENST00000503522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.339±0.00 N/A N/A N/A
ENST00000612429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.888±0.00 N/A N/A N/A
ENST00000619101 1.244±0.00 0.844±0.00 2.650±0.00 1.057±0.39 3.093±0.35 3.273±0.00 0.825±0.00 2.156±0.17 3.683±2.74 2.934±1.96 0.307±0.00 1.988±1.16 2.178±1.61 5.434±2.54
ENST00000622863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000269949 ENST00000602820 0.254±0.00 0.590±0.00 N/A 0.256±0.09 0.389±0.07 0.436±0.28 0.182±0.00 0.357±0.23 0.345±0.00 0.385±0.00 N/A 0.967±0.91 0.157±0.04 0.091±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029249 ENSMUST00000080359 4.022±2.06 7.431±0.84 4.129±0.30 1.741±1.15 5.152±1.67 4.604±0.48 1.529±0.44 4.229±0.42 2.239±0.42 5.822±0.50 0.791±0.30 6.316±1.88 7.053±3.02 1.584±0.96
ENSMUST00000113449 0.987±0.23 0.997±0.00 2.063±0.22 0.411±0.03 1.744±1.46 0.768±0.08 0.832±0.41 0.983±0.26 0.948±0.37 N/A 0.829±0.11 2.690±1.24 4.998±2.07 1.046±0.31
ENSMUSG00000036285 ENSMUST00000047860 9.194±1.69 15.951±2.08 6.343±0.64 7.640±2.88 9.050±2.46 7.407±1.26 5.731±0.75 8.422±1.16 6.493±3.26 3.857±0.50 5.361±0.54 10.795±3.73 5.866±2.92 1.952±0.77
ENSMUST00000139435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.537±0.00 N/A
ENSMUST00000150722 N/A 3.684±1.59 N/A 1.098±0.00 1.743±0.00 N/A N/A N/A 0.554±0.00 0.944±0.16 N/A 2.166±0.47 0.760±0.01 0.480±0.12
ENSMUSG00000093061 ENSMUST00000175320 7713.640±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading