C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cold inducible RNA binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000013351 cirbp 7955 - 22:18766097-18770361 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000105404 cirbp-001 18767280-18770328 protein_coding
  ENSDART00000105405 cirbp-002 18767280-18770331 protein_coding
  ENSDART00000126287 cirbp-201 18767277-18770349 protein_coding
  ENSDART00000132156 cirbp-004 18768042-18768788 protein_coding
  ENSDART00000138915 cirbp-006 18766097-18770361 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000105404ENSDART00000105405ENSDART00000138915
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000105404 164.778±109.59 171.262±17.60 157.956±0.00 77.482±0.00 88.677±0.00
ENSDART00000105405 182.862±40.53 180.816±16.00 105.065±0.00 90.903±0.00 97.959±0.00
ENSDART00000138915 138.788±34.62 105.000±42.95 51.598±0.00 36.293±0.00 52.714±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0009409 IDA response to cold

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000099622 CIRBP cold inducible RNA binding protein protein_coding Homo_sapiens
ENSG00000102317 RBM3 RNA binding motif (RNP1, RRM) protein 3 protein_coding Homo_sapiens
ENSMUSG00000031167 Rbm3 RNA binding motif protein 3 protein_coding Mus_musculus
ENSMUSG00000045193 Cirbp cold inducible RNA binding protein protein_coding Mus_musculus

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