C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 8 (sodium/calcium exchanger), member 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000013422 slc8a1a 7955 - 11:31411397-31487268 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000046800 slc8a1a-201 31411404-31487268 protein_coding
  ENSDART00000089803 slc8a1a-001 31411397-31487268 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000046800ENSDART00000089803
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000046800 N/A 96.091±0.00 1.144±0.00 0.253±0.00 0.363±0.00
ENSDART00000089803 1.144±0.81 57.237±6.40 0.810±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005432 IEA calcium:sodium antiporter activity
GO:0006816 IEA calcium ion transport
GO:0006874 IMP cellular calcium ion homeostasis
GO:0007154 IEA cell communication
GO:0008016 IMP regulation of heart contraction
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0035725 IMP sodium ion transmembrane transport
GO:0045214 IMP sarcomere organization
GO:0055085 IEA transmembrane transport
GO:0070588 IMP calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000183023 SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 protein_coding Homo_sapiens
ENSMUSG00000054640 Slc8a1 solute carrier family 8 (sodium/calcium exchanger), member 1 protein_coding Mus_musculus

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