C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulatory factor X, 2 (influences HLA class II expression)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000013575 rfx2 7955 - 8:20611005-20676269 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000029939 rfx2-001 20611005-20676269 protein_coding
  ENSDART00000122943 rfx2-201 20611082-20644885 protein_coding
  ENSDART00000132218 rfx2-004 20634438-20656567 protein_coding
  ENSDART00000133141 rfx2-002 20634303-20676072 protein_coding
  ENSDART00000147634 rfx2-003 20635896-20676140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000029939ENSDART00000122943
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000029939 3.060±0.83 3.192±0.64 3.916±0.00 0.149±0.00 1.044±0.00
ENSDART00000122943 N/A 6.153±3.85 9.711±0.12 0.084±0.00 0.648±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GQ CIL_0005GQ_0001 CGP 8:20611005-20730169

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007368 IMP determination of left/right symmetry
GO:0070121 IMP Kupffer's vesicle development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000087903 RFX2 regulatory factor X, 2 (influences HLA class II expression) protein_coding Homo_sapiens
ENSMUSG00000024206 Rfx2 regulatory factor X, 2 (influences HLA class II expression) protein_coding Mus_musculus

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