C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulatory factor X, 2 (influences HLA class II expression)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024206 Rfx2 10090 - 17:56775897-56831008 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002444 Rfx2-201 56775897-56831008 protein_coding
  ENSMUST00000086801 Rfx2-202 56775897-56831008 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002444ENSMUST00000086801
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002444 N/A N/A N/A 0.487±0.04 N/A 0.752±0.00 0.205±0.07 0.254±0.03 0.356±0.00 N/A 0.172±0.00 0.991±0.22 N/A 69.555±23.80
ENSMUST00000086801 6.845±3.10 3.881±0.59 3.143±1.33 0.772±0.24 3.810±1.39 4.874±0.45 1.200±0.37 1.331±0.48 3.537±3.43 6.903±0.93 0.894±0.20 6.201±1.93 0.892±0.38 36.149±12.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GQ CIL_0005GQ_0003 CGP 17:56775897-56874447

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013575 rfx2 regulatory factor X, 2 (influences HLA class II expression) protein_coding Danio_rerio
ENSG00000087903 RFX2 regulatory factor X, 2 (influences HLA class II expression) protein_coding Homo_sapiens

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