C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calpain, small subunit 1 b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000013804 capns1b 7955 + 15:28465157-28471924 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000016112 capns1b-001 28465157-28471924 protein_coding
  ENSDART00000153609 capns1b-002 28465203-28471689 protein_coding
  ENSDART00000155057 capns1b-004 28465887-28471614 retained_intron
  ENSDART00000155630 capns1b-003 28465277-28471248 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000016112
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000016112 82.622±11.19 64.010±39.73 26.963±12.90 1.537±0.00 25.802±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000126247 CAPNS1 calpain, small subunit 1 protein_coding Homo_sapiens
ENSG00000256812 CAPNS2 calpain, small subunit 2 protein_coding Homo_sapiens
ENSMUSG00000001794 Capns1 calpain, small subunit 1 protein_coding Mus_musculus
ENSMUSG00000078144 Capns2 calpain, small subunit 2 protein_coding Mus_musculus

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