C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CWC22 spliceosome-associated protein homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000014008 cwc22 7955 - 9:44625558-44717304 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000023684 cwc22-001 44625558-44717304 protein_coding
  ENSDART00000136017 cwc22-002 44695472-44700692 retained_intron

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000023684ENSDART00000136017
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000023684 7.961±2.14 4.940±1.20 16.111±0.00 1.733±0.00 2.431±0.00
ENSDART00000136017 N/A 0.360±0.29 0.536±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004C1 CIL_0004C1_0001 CGP 9:44313629-44717304
CIL_0004C2 CIL_0004C2_0001 CGP 9:44625558-44953369

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005488 IEA binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000163510 CWC22 CWC22 spliceosome-associated protein protein_coding Homo_sapiens
ENSMUSG00000027014 Cwc22 CWC22 spliceosome-associated protein homolog (S. cerevisiae) protein_coding Mus_musculus
ENSMUSG00000079247 Gm13691 predicted gene 13691 protein_coding Mus_musculus
ENSMUSG00000094125 Gm13698 predicted gene 13698 protein_coding Mus_musculus
ENSMUSG00000094336 Gm13693 predicted gene 13693 protein_coding Mus_musculus
ENSMUSG00000095824 Gm13697 predicted gene 13697 protein_coding Mus_musculus
ENSMUSG00000096337 Gm13694 predicted gene 13694 protein_coding Mus_musculus
ENSMUSG00000096484 Gm13696 predicted gene 13696 protein_coding Mus_musculus
ENSMUSG00000096729 Gm13695 predicted gene 13695 protein_coding Mus_musculus

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