C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ST3 beta-galactoside alpha-2,3-sialyltransferase 3b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000015252 st3gal3b 7955 - 2:17085994-17214190 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000100201 st3gal3b-201 17088955-17192710 protein_coding
  ENSDART00000123137 st3gal3b-202 17085994-17192710 protein_coding
  ENSDART00000134951 st3gal3b-002 17160713-17214103 processed_transcript
  ENSDART00000136470 st3gal3b-004 17139058-17214094 protein_coding
  ENSDART00000141188 st3gal3b-001 17088054-17214190 protein_coding
  ENSDART00000146423 st3gal3b-003 17175126-17214014 processed_transcript

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000123137ENSDART00000136470ENSDART00000141188
Transcript ID Heart Kidney Liver Muscle
ENSDART00000123137 1.707±0.00 3.134±1.06 N/A 0.646±0.00
ENSDART00000136470 N/A N/A N/A 0.663±0.00
ENSDART00000141188 1.686±1.12 4.574±0.00 2.745±0.00 0.304±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002F2 CIL_0002F2_0001 CGP 2:17085994-17313945

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0008118 ISS N-acetyllactosaminide alpha-2,3-sialyltransferase activity
GO:0008373 IEA sialyltransferase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016740 IEA transferase activity
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0030173 IEA integral to Golgi membrane
GO:0097503 ISS sialylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000126091 ST3GAL3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein_coding Homo_sapiens
ENSMUSG00000028538 St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein_coding Mus_musculus

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