C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002F2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015252-ENSDARG00000019103 CGP 7955 2:17085994-17313945
GeneTranscriptPositionBiotype
ENSDARG00000019103 (kdm4ab)
lysine (K)-specific demethylase 4A, genome duplicate b
ENSDART00000024302 (kdm4ab-201) 17284549-17313945 protein_coding
CIL_0002F2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028538-ENSMUSG00000033326 CGP 10090 4:117932154-118180043
GeneTranscriptPositionBiotype
ENSMUSG00000028538 (St3gal3)
ST3 beta-galactoside alpha-2,3-sialyltransferase 3
ENSMUST00000030263 (St3gal3-001) 117932154-118134890 protein_coding
ENSMUST00000097912 (St3gal3-003) 117932160-118134882 protein_coding
ENSMUST00000106410 (St3gal3-002) 117932158-118134914 protein_coding
ENSMUST00000126336 (St3gal3-005) 117940446-117968448 protein_coding
ENSMUST00000138274 (St3gal3-004) 117940354-118031882 protein_coding
ENSMUSG00000086554 (9530034E10Rik)
RIKEN cDNA 9530034E10 gene
ENSMUST00000146982 (9530034E10Rik-001) 117975036-117993972 antisense
ENSMUSG00000088303 (Gm23382)
predicted gene, 23382
ENSMUST00000157678 (Gm23382-201) 118164078-118164181 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002F2_0001ENSDARG00000019103ENSDART00000024302CIL_0002F2_0002ENSMUSG00000028538ENSMUST00000030263ENSMUST00000097912ENSMUST00000106410ENSMUST00000126336ENSMUST00000138274ENSMUSG00000086554ENSMUST00000146982ENSMUSG00000088303ENSMUST00000157678
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002F2_0001ENSDARG00000019103ENSDART00000024302CIL_0002F2_0002ENSMUSG00000028538ENSMUST00000030263ENSMUST00000097912ENSMUST00000106410ENSMUST00000126336ENSMUST00000138274ENSMUSG00000086554ENSMUST00000146982ENSMUSG00000088303ENSMUST00000157678
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019103 ENSDART00000024302 N/A N/A N/A 3.514±2.80 N/A N/A 5.810±0.00 0.360±0.00 0.642±0.00 N/A 2.317±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028538 ENSMUST00000030263 5.939±2.21 16.762±0.95 5.179±0.05 7.850±2.75 7.644±1.47 20.090±4.59 12.473±2.37 7.053±1.97 6.428±5.15 4.189±1.98 19.382±1.53 9.522±3.42 2.544±0.89 0.703±0.27
ENSMUST00000097912 N/A N/A N/A 8.542±2.26 N/A N/A 2.937±0.05 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106410 12.492±5.27 9.054±0.00 6.179±0.16 N/A 10.034±3.27 25.121±7.85 9.747±1.44 14.595±1.29 6.829±6.38 5.211±1.84 7.499±1.52 6.518±2.63 2.216±0.16 0.935±0.22
ENSMUST00000126336 N/A N/A N/A 35.220±0.00 N/A N/A N/A N/A N/A N/A N/A 21.742±0.00 6.793±1.94 N/A
ENSMUST00000138274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.443±0.00
ENSMUSG00000086554 ENSMUST00000146982 0.787±0.28 0.191±0.06 21.459±2.36 0.196±0.00 0.622±0.34 0.456±0.09 0.140±0.00 0.329±0.26 0.139±0.11 0.242±0.10 0.126±0.04 0.547±0.28 0.015±0.00 0.500±0.24
ENSMUSG00000088303 ENSMUST00000157678 N/A N/A 92.883±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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