C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ST3 beta-galactoside alpha-2,3-sialyltransferase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028538 St3gal3 10090 - 4:117932154-118134914 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030263 St3gal3-001 117932154-118134890 protein_coding
  ENSMUST00000097912 St3gal3-003 117932160-118134882 protein_coding
  ENSMUST00000106410 St3gal3-002 117932158-118134914 protein_coding
  ENSMUST00000126336 St3gal3-005 117940446-117968448 protein_coding
  ENSMUST00000138274 St3gal3-004 117940354-118031882 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030263ENSMUST00000097912ENSMUST00000106410ENSMUST00000126336ENSMUST00000138274
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030263 5.939±2.21 16.762±0.95 5.179±0.05 7.850±2.75 7.644±1.47 20.090±4.59 12.473±2.37 7.053±1.97 6.428±5.15 4.189±1.98 19.382±1.53 9.522±3.42 2.544±0.89 0.703±0.27
ENSMUST00000097912 N/A N/A N/A 8.542±2.26 N/A N/A 2.937±0.05 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106410 12.492±5.27 9.054±0.00 6.179±0.16 N/A 10.034±3.27 25.121±7.85 9.747±1.44 14.595±1.29 6.829±6.38 5.211±1.84 7.499±1.52 6.518±2.63 2.216±0.16 0.935±0.22
ENSMUST00000126336 N/A N/A N/A 35.220±0.00 N/A N/A N/A N/A N/A N/A N/A 21.742±0.00 6.793±1.94 N/A
ENSMUST00000138274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.443±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599
CIL_0002F2 CIL_0002F2_0002 CGP 4:117932154-118180043

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003836 IDA beta-galactoside (CMP) alpha-2,3-sialyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006486 IDA:IEA protein glycosylation
GO:0008118 IEA N-acetyllactosaminide alpha-2,3-sialyltransferase activity
GO:0016021 IEA integral component of membrane
GO:0030173 IEA integral component of Golgi membrane
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015252 st3gal3b ST3 beta-galactoside alpha-2,3-sialyltransferase 3b protein_coding Danio_rerio
ENSDARG00000015374 st3gal3a ST3 beta-galactoside alpha-2,3-sialyltransferase 3a protein_coding Danio_rerio
ENSG00000126091 ST3GAL3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 protein_coding Homo_sapiens

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