C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vacuolar protein sorting 26 homolog B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000015823 vps26b 7955 + 15:18225151-18231532 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000022015 vps26b-001 18225151-18231532 protein_coding
  ENSDART00000148345 vps26b-002 18225512-18228208 retained_intron
  ENSDART00000149926 vps26b-003 18225181-18230397 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000022015ENSDART00000149926
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000022015 11.270±1.70 8.125±3.98 21.406±6.46 1.063±0.00 1.957±0.00
ENSDART00000149926 N/A N/A N/A N/A 0.587±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VG CIL_0005VG_0001 CGP 15:18225151-18234902

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0006810 IEA transport
GO:0007034 IEA vacuolar transport
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0030904 IEA retromer complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000151502 VPS26B vacuolar protein sorting 26 homolog B (S. pombe) protein_coding Homo_sapiens
ENSMUSG00000031988 Vps26b vacuolar protein sorting 26 homolog B (yeast) protein_coding Mus_musculus

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