Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	vacuolar protein sorting 26 homolog B (S. pombe)
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000151502	VPS26B	9606	+	11:134224645-134247792	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000281187		VPS26B-001	134224645-134247792	protein_coding
	ENST00000525095		VPS26B-002	134224677-134245729	protein_coding
	ENST00000525918		VPS26B-007	134239651-134243234	retained_intron
	ENST00000527586		VPS26B-004	134225194-134243733	nonsense_mediated_decay
	ENST00000530402		VPS26B-005	134234962-134243196	processed_transcript
	ENST00000531741		VPS26B-006	134243852-134246287	retained_intron
	ENST00000532160		VPS26B-003	134225299-134235707	retained_intron

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta
ENST00000281187	13.657±0.00	10.764±0.00	2.030±0.00	7.078±0.00	9.888±5.27	11.529±7.99	6.446±4.66	11.252±0.00	5.039±0.00	2.417±0.00	2.232±1.29	4.517±0.00	17.894±0.00
ENST00000525095	23.521±0.00	N/A	N/A	11.388±0.00	N/A	N/A	3.914±0.00	5.019±0.00	N/A	N/A	1.978±0.00	N/A	N/A

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0005VG	CIL_0005VG_0002	CGP	11:134224645-134253370

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005829	ISS	cytosol
GO:0015031	IEA	protein transport
GO:0016020	IEA	membrane
GO:0043231	IDA	intracellular membrane-bounded organelle

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000015823	vps26b	vacuolar protein sorting 26 homolog B	protein_coding	Danio_rerio
ENSDARG00000055433	vps26bl	vacuolar protein sorting 26 homolog B, like	protein_coding	Danio_rerio
ENSMUSG00000031988	Vps26b	vacuolar protein sorting 26 homolog B (yeast)	protein_coding	Mus_musculus

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