C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005VG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015823-ENSDARG00000042659 CGP 7955 15:18225151-18234902
GeneTranscriptPositionBiotype
ENSDARG00000015823 (vps26b)
vacuolar protein sorting 26 homolog B 		ENSDART00000022015 (vps26b-001) 18225151-18231532 protein_coding
ENSDART00000148345 (vps26b-002) 18225512-18228208 retained_intron
ENSDART00000149926 (vps26b-003) 18225181-18230397 nonsense_mediated_decay
ENSDARG00000042659 (thyn1)
thymocyte nuclear protein 1 		ENSDART00000062576 (thyn1-001) 18231613-18234902 protein_coding
CIL_0005VG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151502-ENSG00000151500 CGP 9606 11:134224645-134253370
GeneTranscriptPositionBiotype
ENSG00000151500 (THYN1)
thymocyte nuclear protein 1 		ENST00000341541 (THYN1-002) 134248279-134253344 protein_coding
ENST00000352327 (THYN1-001) 134248288-134253350 protein_coding
ENST00000392594 (THYN1-004) 134248279-134253370 protein_coding
ENST00000392595 (THYN1-005) 134248279-134253248 protein_coding
ENST00000525677 (THYN1-006) 134251231-134253301 processed_transcript
ENST00000531135 (THYN1-009) 134248882-134253353 retained_intron
ENST00000533781 (THYN1-008) 134249889-134251778 retained_intron
ENST00000533975 (THYN1-003) 134249039-134253348 retained_intron
ENSG00000151502 (VPS26B)
vacuolar protein sorting 26 homolog B (S. pombe) 		ENST00000281187 (VPS26B-001) 134224645-134247792 protein_coding
ENST00000525095 (VPS26B-002) 134224677-134245729 protein_coding
ENST00000525918 (VPS26B-007) 134239651-134243234 retained_intron
ENST00000527586 (VPS26B-004) 134225194-134243733 nonsense_mediated_decay
ENST00000530402 (VPS26B-005) 134234962-134243196 processed_transcript
ENST00000531741 (VPS26B-006) 134243852-134246287 retained_intron
ENST00000532160 (VPS26B-003) 134225299-134235707 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VG_0001ENSDARG00000015823ENSDART00000022015ENSDART00000148345ENSDART00000149926ENSDARG00000042659ENSDART00000062576CIL_0005VG_0002ENSG00000151500ENST00000341541ENST00000352327ENST00000392594ENST00000392595ENST00000525677ENST00000531135ENST00000533781ENST00000533975ENSG00000151502ENST00000281187ENST00000525095ENST00000525918ENST00000527586ENST00000530402ENST00000531741ENST00000532160
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VG_0001ENSDARG00000015823ENSDART00000022015ENSDART00000149926ENSDARG00000042659ENSDART00000062576CIL_0005VG_0002ENSG00000151500ENST00000341541ENST00000352327ENST00000392594ENST00000392595ENST00000533975ENSG00000151502ENST00000281187ENST00000525095
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015823 ENSDART00000022015 N/A N/A N/A 11.270±1.70 N/A N/A 8.125±3.98 21.406±6.46 1.063±0.00 N/A 1.957±0.00 N/A N/A N/A
ENSDART00000148345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.587±0.00 N/A N/A N/A
ENSDARG00000042659 ENSDART00000062576 N/A N/A N/A 1.183±0.37 N/A N/A 1.297±0.61 6.149±0.00 0.188±0.00 N/A 0.405±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151500 ENST00000341541 1.969±0.00 3.631±0.00 N/A 7.629±2.97 1.744±0.00 3.179±0.00 2.897±0.00 6.735±0.00 2.214±0.60 2.554±0.00 1.605±0.00 8.430±4.17 4.500±3.52 9.336±2.87
ENST00000352327 4.614±0.00 N/A N/A 6.642±1.01 3.410±0.10 2.378±0.00 N/A N/A N/A N/A N/A 7.186±4.26 2.861±1.45 7.239±1.23
ENST00000392594 7.189±0.00 15.605±0.00 1.762±0.00 11.882±0.00 8.966±4.70 10.042±7.24 4.955±2.11 5.605±1.61 6.793±3.99 5.875±4.75 6.296±0.00 9.451±0.00 2.652±0.68 17.925±7.98
ENST00000392595 10.183±0.00 N/A N/A 5.452±0.00 N/A N/A N/A 6.019±0.00 N/A 2.289±0.00 0.277±0.00 12.180±7.02 7.989±0.39 N/A
ENST00000525677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533975 N/A N/A 0.822±0.00 N/A 1.572±0.00 2.709±1.08 0.778±0.00 N/A N/A 1.465±0.00 N/A 3.908±0.00 N/A 11.751±0.00
ENSG00000151502 ENST00000281187 13.657±0.00 10.764±0.00 2.030±0.00 7.078±0.00 9.888±5.27 11.529±7.99 6.446±4.66 11.252±0.00 5.039±0.00 2.417±0.00 2.232±1.29 4.517±0.00 17.894±0.00 N/A
ENST00000525095 23.521±0.00 N/A N/A 11.388±0.00 N/A N/A 3.914±0.00 5.019±0.00 N/A N/A 1.978±0.00 N/A N/A N/A
ENST00000525918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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