C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vacuolar protein sorting 26 homolog B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000149926 vps26b-003 ENSDARG00000015823 7955 + 15:18225181-18230397 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSDART00000149926
Transcript ID Muscle
ENSDART00000149926 0.587±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VG CIL_0005VG_0001 CGP 15:18225151-18234902

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007034 IEA vacuolar transport
GO:0030904 IEA retromer complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281187 VPS26B-001 protein_coding Homo_sapiens 0 438
ENST00000525095 VPS26B-002 protein_coding Homo_sapiens 0 438
ENST00000531741 VPS26B-006 retained_intron Homo_sapiens 5e-19 100

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