C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein, transmembrane 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000015917 rnft1 7955 + 10:28842046-28850950 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000022484 rnft1-001 28842046-28850950 protein_coding
  ENSDART00000131003 rnft1-002 28842078-28844028 processed_transcript

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000022484
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000022484 2.448±1.48 15.021±7.21 13.756±6.82 0.715±0.00 2.320±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039N CIL_00039N_0001 CGP 10:28711823-28850950

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000189050 RNFT1 ring finger protein, transmembrane 1 protein_coding Homo_sapiens
ENSMUSG00000020521 Rnft1 ring finger protein, transmembrane 1 protein_coding Mus_musculus

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