C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GATA-binding protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000016526 gata3 7955 - 4:24141643-24151643 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000025153 gata3-001 24141643-24151643 protein_coding
  ENSDART00000149971 gata3-002 24145608-24147869 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000025153
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000025153 13.924±11.81 3.067±2.71 3.391±2.12 0.180±0.00 3.377±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RS CIL_0003RS_0001 CGP 4:22817287-24151643
CIL_0007J5 CIL_0007J5_0003 UCNEbase 4:23895941-24194175

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0021514 IMP ventral spinal cord interneuron differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding
GO:0060788 IGI ectodermal placode formation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000107485 GATA3 GATA binding protein 3 protein_coding Homo_sapiens
ENSMUSG00000015619 Gata3 GATA binding protein 3 protein_coding Mus_musculus

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