C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transferrin-a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000016771 tfa 7955 - 2:16581385-16592930 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000003845 tfa-201 16581416-16592909 protein_coding
  ENSDART00000108611 tfa-001 16581385-16592923 protein_coding
  ENSDART00000124119 tfa-002 16587956-16592842 retained_intron
  ENSDART00000125647 tfa-004 16581469-16592930 protein_coding
  ENSDART00000127207 tfa-202 16590032-16592930 protein_coding
  ENSDART00000155147 tfa-003 16581401-16592558 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000003845ENSDART00000108611ENSDART00000125647ENSDART00000155147
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000003845 0.169±0.00 32.858±0.00 N/A 686.757±0.00 N/A
ENSDART00000108611 20.684±20.27 80.273±47.95 675.093±624.30 3689.430±0.00 170.671±0.00
ENSDART00000125647 3.100±0.41 15.038±14.06 N/A N/A N/A
ENSDART00000155147 N/A N/A 151.561±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0006826 IEA iron ion transport
GO:0006879 IEA cellular iron ion homeostasis
GO:0008199 IEA ferric iron binding
GO:0009617 IDA response to bacterium

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000012223 LTF lactotransferrin protein_coding Homo_sapiens
ENSG00000091513 TF transferrin protein_coding Homo_sapiens
ENSMUSG00000032496 Ltf lactotransferrin protein_coding Mus_musculus
ENSMUSG00000032554 Trf transferrin protein_coding Mus_musculus
ENSMUSG00000033688 1300017J02Rik RIKEN cDNA 1300017J02 gene protein_coding Mus_musculus
ENSMUSG00000090639 Gm20425 predicted gene 20425 protein_coding Mus_musculus

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