C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000017522 ctdp1 7955 - 19:12254283-12470270 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000111517 ctdp1-201 12254283-12470116 protein_coding
  ENSDART00000148516 ctdp1-001 12256146-12470270 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000111517ENSDART00000148516
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000111517 1.265±0.33 1.113±0.50 0.906±0.00 0.051±0.00 0.902±0.00
ENSDART00000148516 N/A 0.670±0.42 0.467±0.25 0.059±0.00 0.355±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001P4 CIL_0001P4_0001 CGP 19:12129824-12470270

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000060069 CTDP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein_coding Homo_sapiens
ENSMUSG00000033323 Ctdp1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein_coding Mus_musculus

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