C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001P4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035961-ENSDARG00000017522 CGP 7955 19:12129824-12470270
GeneTranscriptPositionBiotype
ENSDARG00000017522 (ctdp1)
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 		ENSDART00000111517 (ctdp1-201) 12254283-12470116 protein_coding
ENSDART00000148516 (ctdp1-001) 12256146-12470270 protein_coding
ENSDARG00000035961 (KCNG2)
potassium voltage-gated channel, subfamily G, member 2 		ENSDART00000103646 (KCNG2-201) 12129824-12169950 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001P4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059852-ENSMUSG00000033323 CGP 10090 18:80294546-80469695
GeneTranscriptPositionBiotype
ENSMUSG00000033323 (Ctdp1)
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 		ENSMUST00000036229 (Ctdp1-001) 80407959-80469695 protein_coding
ENSMUST00000160434 (Ctdp1-002) 80408736-80440788 processed_transcript
ENSMUST00000161003 (Ctdp1-003) 80407965-80440859 protein_coding
ENSMUSG00000059852 (Kcng2)
potassium voltage-gated channel, subfamily G, member 2 		ENSMUST00000077962 (Kcng2-001) 80294546-80364254 protein_coding
ENSMUST00000184366 (Kcng2-002) 80322944-80363650 protein_coding
ENSMUST00000184574 (Kcng2-003) 80322679-80363336 protein_coding
ENSMUSG00000097593 (Gm26676)
predicted gene, 26676 		ENSMUST00000181877 (Gm26676-001) 80323335-80326605 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001P4_0001ENSDARG00000017522ENSDART00000111517ENSDART00000148516ENSDARG00000035961ENSDART00000103646CIL_0001P4_0002ENSMUSG00000033323ENSMUST00000036229ENSMUST00000160434ENSMUST00000161003ENSMUSG00000059852ENSMUST00000077962ENSMUST00000184366ENSMUST00000184574ENSMUSG00000097593ENSMUST00000181877
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001P4_0001ENSDARG00000017522ENSDART00000111517ENSDART00000148516ENSDARG00000035961ENSDART00000103646CIL_0001P4_0002ENSMUSG00000033323ENSMUST00000036229ENSMUST00000160434ENSMUST00000161003ENSMUSG00000059852ENSMUST00000077962ENSMUST00000184366ENSMUSG00000097593ENSMUST00000181877
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017522 ENSDART00000111517 N/A N/A N/A 1.265±0.33 N/A N/A 1.113±0.50 0.906±0.00 0.051±0.00 N/A 0.902±0.00 N/A N/A N/A
ENSDART00000148516 N/A N/A N/A N/A N/A N/A 0.670±0.42 0.467±0.25 0.059±0.00 N/A 0.355±0.00 N/A N/A N/A
ENSDARG00000035961 ENSDART00000103646 N/A N/A N/A 5.174±0.97 N/A N/A 3.247±0.38 0.466±0.08 0.038±0.00 N/A 0.257±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033323 ENSMUST00000036229 5.006±2.10 5.802±0.45 4.474±0.03 7.081±1.19 5.849±2.17 7.716±1.24 1.997±0.31 3.984±0.72 3.854±2.08 7.839±1.51 1.900±0.47 9.145±2.14 6.694±2.48 3.129±0.71
ENSMUST00000160434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.372±0.00 14.901±5.43 49.731±41.00
ENSMUST00000161003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.624±0.00 2.622±0.38 5.475±2.57 8.897±2.31
ENSMUSG00000059852 ENSMUST00000077962 N/A 0.926±0.22 N/A 0.271±0.06 0.047±0.00 0.616±0.19 40.750±7.05 N/A 0.125±0.05 0.608±0.00 0.070±0.04 0.642±0.50 0.091±0.06 0.231±0.18
ENSMUST00000184366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.648±0.01 4.606±0.00 N/A N/A
ENSMUST00000184574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097593 ENSMUST00000181877 N/A 0.040±0.00 0.005±0.00 0.030±0.02 N/A 0.068±0.00 0.223±0.01 0.015±0.00 0.008±0.00 N/A 0.010±0.00 0.014±0.00 0.005±0.00 0.030±0.01

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