C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033323 Ctdp1 10090 - 18:80407959-80469695 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036229 Ctdp1-001 80407959-80469695 protein_coding
  ENSMUST00000160434 Ctdp1-002 80408736-80440788 processed_transcript
  ENSMUST00000161003 Ctdp1-003 80407965-80440859 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036229ENSMUST00000160434ENSMUST00000161003
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036229 5.006±2.10 5.802±0.45 4.474±0.03 7.081±1.19 5.849±2.17 7.716±1.24 1.997±0.31 3.984±0.72 3.854±2.08 7.839±1.51 1.900±0.47 9.145±2.14 6.694±2.48 3.129±0.71
ENSMUST00000160434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.372±0.00 14.901±5.43 49.731±41.00
ENSMUST00000161003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.624±0.00 2.622±0.38 5.475±2.57 8.897±2.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y9 CIL_0007Y9_0002 VISTA 18:80030119-80632361
CIL_0001P4 CIL_0001P4_0002 CGP 18:80294546-80469695

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000922 ISS spindle pole
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005813 ISS centrosome
GO:0005819 ISS spindle
GO:0006470 ISS protein dephosphorylation
GO:0008420 IEA CTD phosphatase activity
GO:0010458 ISS exit from mitosis
GO:0015629 IEA actin cytoskeleton
GO:0030496 ISS midbody
GO:0051233 ISS spindle midzone

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017522 ctdp1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein_coding Danio_rerio
ENSG00000060069 CTDP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 protein_coding Homo_sapiens

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