C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sodium channel, voltage-gated, type VIII, alpha b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000018032 scn8ab 7955 - 6:39323306-39420054 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000022761 scn8ab-201 39323306-39406168 protein_coding
  ENSDART00000151299 scn8ab-001 39323306-39420054 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000022761ENSDART00000151299
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000022761 3.087±0.00 0.063±0.01 N/A N/A 0.646±0.00
ENSDART00000151299 N/A N/A 0.131±0.02 0.050±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001518 IEA voltage-gated sodium channel complex
GO:0005216 IEA ion channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005248 IEA voltage-gated sodium channel activity
GO:0005272 IEA sodium channel activity
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006814 IEA sodium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196876 SCN8A sodium channel, voltage gated, type VIII, alpha subunit protein_coding Homo_sapiens
ENSMUSG00000023033 Scn8a sodium channel, voltage-gated, type VIII, alpha protein_coding Mus_musculus

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