C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polypyrimidine tract binding protein 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000019362 ptbp1a 7955 + 2:26436471-26448789 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000017668 ptbp1a-001 26436471-26448789 protein_coding
  ENSDART00000141564 ptbp1a-002 26437472-26438860 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000017668
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000017668 2.521±0.94 8.376±4.55 28.969±2.26 1.548±0.00 3.822±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0009953 IMP dorsal/ventral pattern formation
GO:0045746 IMP negative regulation of Notch signaling pathway
GO:0060472 IMP positive regulation of cortical granule exocytosis by positive regulation of cytosolic calcium ion concentration
GO:0060729 IMP intestinal epithelial structure maintenance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000011304 PTBP1 polypyrimidine tract binding protein 1 protein_coding Homo_sapiens
ENSMUSG00000006498 Ptbp1 polypyrimidine tract binding protein 1 protein_coding Mus_musculus

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