C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: H3 histone, family 3A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000020504 h3f3a 7955 - 3:45814483-45816236 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000027623 h3f3a-201 45814735-45815326 protein_coding
  ENSDART00000145937 h3f3a-002 45814493-45816222 retained_intron
  ENSDART00000146211 h3f3a-001 45814483-45816236 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000027623ENSDART00000146211
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000027623 117.212±78.52 48.453±20.70 255.159±0.00 7.307±0.00 14.233±0.00
ENSDART00000146211 78.086±16.87 68.057±30.33 212.801±61.22 3.160±0.00 13.968±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IDA nucleosome
GO:0003677 IEA DNA binding
GO:0006334 IEA nucleosome assembly
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000132475 H3F3B H3 histone, family 3B (H3.3B) protein_coding Homo_sapiens
ENSG00000163041 H3F3A H3 histone, family 3A protein_coding Homo_sapiens
ENSMUSG00000016559 H3f3b H3 histone, family 3B protein_coding Mus_musculus

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