C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MCF.2 cell line derived transforming sequence a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000022895 mcf2a 7955 - 14:33312031-33372996 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000034883 mcf2a-001 33312031-33372996 protein_coding
  ENSDART00000148830 mcf2a-002 33352254-33356636 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleENSDART00000034883
Transcript ID Brain Heart Muscle
ENSDART00000034883 3.356±2.82 0.131±0.09 0.351±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PO CIL_0000PO_0001 CGP 14:33300861-33372996
CIL_0000PN CIL_0000PN_0001 CGP 14:33312031-33500892

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000101977 MCF2 MCF.2 cell line derived transforming sequence protein_coding Homo_sapiens
ENSMUSG00000031139 Mcf2 mcf.2 transforming sequence protein_coding Mus_musculus

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