C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type IV, alpha 3 (Goodpasture antigen) binding protein a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000024325 col4a3bpa 7955 + 5:52599245-52654187 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000035299 col4a3bpa-201 52599568-52650625 protein_coding
  ENSDART00000092938 col4a3bpa-002 52599568-52650625 protein_coding
  ENSDART00000148501 col4a3bpa-004 52639451-52649242 protein_coding
  ENSDART00000149500 col4a3bpa-005 52644677-52646674 retained_intron
  ENSDART00000149787 col4a3bpa-001 52599245-52654187 protein_coding
  ENSDART00000149892 col4a3bpa-003 52639486-52650635 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000035299ENSDART00000092938ENSDART00000149787ENSDART00000149892
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000035299 1.070±0.43 1.147±0.00 4.452±0.00 N/A N/A
ENSDART00000092938 N/A N/A N/A 0.246±0.00 N/A
ENSDART00000149787 0.898±0.00 0.704±0.28 2.386±0.29 0.290±0.00 0.938±0.00
ENSDART00000149892 0.678±0.00 0.736±0.31 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XB CIL_0002XB_0001 CGP 5:52599245-52678922

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008289 IEA lipid binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000113163 COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein protein_coding Homo_sapiens
ENSMUSG00000021669 Col4a3bp collagen, type IV, alpha 3 (Goodpasture antigen) binding protein protein_coding Mus_musculus

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