C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poly(A)-specific ribonuclease (deadenylation nuclease)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000024702 parn 7955 + 1:60290533-60300397 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000030873 parn-002 60290533-60300397 protein_coding
  ENSDART00000152188 parn-005 60290603-60295860 protein_coding
  ENSDART00000152298 parn-003 60290593-60300381 protein_coding
  ENSDART00000152305 parn-001 60290533-60300397 protein_coding
  ENSDART00000152384 parn-004 60290579-60295091 retained_intron
  ENSDART00000152746 parn-006 60297487-60300306 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000030873ENSDART00000152188ENSDART00000152298ENSDART00000152305
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000030873 15.214±1.60 6.202±2.28 37.742±0.00 0.866±0.00 3.818±0.00
ENSDART00000152188 1.120±0.00 N/A N/A N/A N/A
ENSDART00000152298 3.741±0.86 N/A 15.774±3.58 N/A N/A
ENSDART00000152305 2.681±1.85 1.789±0.10 8.792±0.00 0.960±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0004535 IEA poly(A)-specific ribonuclease activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006402 IEA mRNA catabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000140694 PARN poly(A)-specific ribonuclease protein_coding Homo_sapiens
ENSMUSG00000022685 Parn poly(A)-specific ribonuclease (deadenylation nuclease) protein_coding Mus_musculus

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