C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A)-specific ribonuclease (deadenylation nuclease)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000030873 parn-002 ENSDARG00000024702 7955 + 1:60290533-60300397 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000030873
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000030873 15.214±1.60 6.202±2.28 37.742±0.00 0.866±0.00 3.818±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0004535 IEA poly(A)-specific ribonuclease activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006402 IEA mRNA catabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058884 Parn-201 protein_coding Mus_musculus 0 427

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