C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine/arginine-rich splicing factor 3a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000025397 srsf3a 7955 - 6:41010867-41022102 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000028217 srsf3a-001 41010867-41016321 protein_coding
  ENSDART00000143944 srsf3a-006 41013082-41016307 protein_coding
  ENSDART00000153666 srsf3a-005 41017472-41022045 retained_intron
  ENSDART00000153818 srsf3a-004 41011071-41022102 protein_coding
  ENSDART00000154587 srsf3a-002 41011161-41016311 nonsense_mediated_decay
  ENSDART00000154963 srsf3a-003 41013190-41022015 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000028217ENSDART00000143944ENSDART00000153666ENSDART00000154587ENSDART00000154963
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000028217 22.965±1.63 14.129±3.47 14.471±0.00 3.609±0.00 N/A
ENSDART00000143944 16.291±0.00 14.459±3.94 N/A N/A N/A
ENSDART00000153666 N/A N/A 36.498±0.00 N/A N/A
ENSDART00000154587 20.199±0.00 19.684±2.31 18.550±0.00 3.494±0.00 12.481±0.00
ENSDART00000154963 N/A N/A N/A 2.642±0.00 8.402±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000112081 SRSF3 serine/arginine-rich splicing factor 3 protein_coding Homo_sapiens
ENSMUSG00000071172 Srsf3 serine/arginine-rich splicing factor 3 protein_coding Mus_musculus
ENSMUSG00000078134 Gm12355 predicted gene 12355 protein_coding Mus_musculus

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