C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 12355
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078134 Gm12355 10090 - 11:98624351-98625661 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000104933 Gm12355-001 98624351-98625661 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000104933
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000104933 0.042±0.00 0.138±0.00 2.469±2.35 6.519±4.84 0.122±0.06 0.187±0.00 0.087±0.04 0.104±0.05 2.334±4.56 0.129±0.06 0.041±0.02 0.187±0.16 0.043±0.02 0.125±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080Z CIL_00080Z_0002 VISTA 11:98039002-98639485
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025397 srsf3a serine/arginine-rich splicing factor 3a protein_coding Danio_rerio
ENSDARG00000059360 srsf3b serine/arginine-rich splicing factor 3b protein_coding Danio_rerio
ENSG00000112081 SRSF3 serine/arginine-rich splicing factor 3 protein_coding Homo_sapiens

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