C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific protease 20
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000027501 usp20 7955 + 5:34916598-34948192 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000006021 usp20-201 34916602-34948192 protein_coding
  ENSDART00000030969 usp20-202 34916598-34948192 protein_coding
  ENSDART00000097945 usp20-203 34918921-34943403 protein_coding
  ENSDART00000111946 usp20-204 34916602-34925790 protein_coding
  ENSDART00000122077 usp20-205 34916602-34948192 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000006021ENSDART00000030969ENSDART00000111946
Transcript ID Brain Heart Kidney Liver
ENSDART00000006021 N/A 1.291±0.00 1.098±0.00 0.085±0.00
ENSDART00000030969 19.175±2.38 N/A N/A N/A
ENSDART00000111946 N/A N/A N/A 0.155±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M0 CIL_0002M0_0001 CGP 5:34913576-34948192

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004197 ISS cysteine-type endopeptidase activity
GO:0004221 IEA ubiquitin thiolesterase activity
GO:0005737 IEA cytoplasm
GO:0005813 ISS centrosome
GO:0005856 IEA cytoskeleton
GO:0006508 IEA proteolysis
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0006897 IEA endocytosis
GO:0008233 IEA peptidase activity
GO:0008234 IEA cysteine-type peptidase activity
GO:0008270 IEA zinc ion binding
GO:0008277 ISS regulation of G-protein coupled receptor protein signaling pathway
GO:0016579 ISS protein deubiquitination
GO:0016787 IEA hydrolase activity
GO:0021551 IMP central nervous system morphogenesis
GO:0046872 IEA metal ion binding
GO:0048471 IEA perinuclear region of cytoplasm
GO:0070536 ISS protein K63-linked deubiquitination
GO:0071108 ISS protein K48-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000136878 USP20 ubiquitin specific peptidase 20 protein_coding Homo_sapiens
ENSMUSG00000026854 Usp20 ubiquitin specific peptidase 20 protein_coding Mus_musculus

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