C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type XXVII, alpha 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000028236 col27a1b 7955 - 5:67690154-67819841 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000097297 col27a1b-201 67690154-67819841 protein_coding
  ENSDART00000137363 col27a1b-001 67690154-67771622 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000097297ENSDART00000137363
Transcript ID Brain Heart Liver Muscle
ENSDART00000097297 0.271±0.10 N/A 0.007±0.00 0.091±0.00
ENSDART00000137363 N/A 0.115±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005581 IEA collagen

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196739 COL27A1 collagen, type XXVII, alpha 1 protein_coding Homo_sapiens
ENSMUSG00000045672 Col27a1 collagen, type XXVII, alpha 1 protein_coding Mus_musculus

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