C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type XXVII, alpha 1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000137363 col27a1b-001 ENSDARG00000028236 7955 - 5:67690154-67771622 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENSDART00000137363
Transcript ID Heart
ENSDART00000137363 0.115±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005581 IEA collagen

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036300 Col27a1-001 protein_coding Mus_musculus 8.00001e-42 178
ENSMUST00000184067 Col27a1-004 nonsense_mediated_decay Mus_musculus 3.99931e-42 178
ENST00000356083 COL27A1-001 protein_coding Homo_sapiens 9.99995e-41 174

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