C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sortilin 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000029402 sort1a 7955 - 11:37123786-37181817 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000020187 sort1a-201 37123805-37181817 protein_coding
  ENSDART00000134481 sort1a-002 37131597-37132471 retained_intron
  ENSDART00000146093 sort1a-001 37123786-37181817 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000020187ENSDART00000134481ENSDART00000146093
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000020187 N/A 1.657±0.10 N/A 0.204±0.00 5.207±0.00
ENSDART00000134481 N/A N/A N/A 0.478±0.00 N/A
ENSDART00000146093 5.765±3.20 7.127±0.00 1.907±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000734 CIL_000734_0001 CGP 11:37123786-37191782

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000134243 SORT1 sortilin 1 protein_coding Homo_sapiens
ENSMUSG00000068747 Sort1 sortilin 1 protein_coding Mus_musculus

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