C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000734_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000029402-ENSDARG00000003526 CGP 7955 11:37123786-37191782
GeneTranscriptPositionBiotype
ENSDARG00000003526 (psma5)
proteasome (prosome, macropain) subunit, alpha type,5 		ENSDART00000020655 (psma5-001) 37183786-37191782 protein_coding
ENSDART00000141477 (psma5-002) 37184064-37191210 protein_coding
ENSDART00000146495 (psma5-003) 37186325-37191665 protein_coding
ENSDARG00000029402 (sort1a)
sortilin 1a 		ENSDART00000020187 (sort1a-201) 37123805-37181817 protein_coding
ENSDART00000134481 (sort1a-002) 37131597-37132471 retained_intron
ENSDART00000146093 (sort1a-001) 37123786-37181817 protein_coding
CIL_000734_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134243-ENSG00000143106 CGP 9606 1:109309568-109426427
GeneTranscriptPositionBiotype
ENSG00000134243 (SORT1)
sortilin 1 		ENST00000256637 (SORT1-001) 109309570-109397951 protein_coding
ENST00000466471 (SORT1-003) 109326806-109336302 retained_intron
ENST00000471996 (SORT1-006) 109369530-109397861 processed_transcript
ENST00000482236 (SORT1-007) 109354485-109393357 processed_transcript
ENST00000483508 (SORT1-004) 109366783-109369589 retained_intron
ENST00000485149 (SORT1-002) 109313801-109316927 processed_transcript
ENST00000493736 (SORT1-008) 109350947-109389899 processed_transcript
ENST00000495777 (SORT1-005) 109368478-109369589 processed_transcript
ENST00000538502 (SORT1-201) 109309568-109393357 protein_coding
ENSG00000143106 (PSMA5)
proteasome (prosome, macropain) subunit, alpha type, 5 		ENST00000271308 (PSMA5-001) 109399031-109426351 protein_coding
ENST00000477897 (PSMA5-005) 109411870-109412285 processed_transcript
ENST00000484563 (PSMA5-003) 109411953-109426427 processed_transcript
ENST00000490870 (PSMA5-002) 109401850-109426132 processed_transcript
ENST00000491287 (PSMA5-004) 109414809-109415365 processed_transcript
ENST00000538610 (PSMA5-201) 109402013-109426132 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000734_0001ENSDARG00000003526ENSDART00000020655ENSDART00000141477ENSDART00000146495ENSDARG00000029402ENSDART00000020187ENSDART00000134481ENSDART00000146093CIL_000734_0002ENSG00000134243ENST00000256637ENST00000466471ENST00000471996ENST00000482236ENST00000483508ENST00000485149ENST00000493736ENST00000495777ENST00000538502ENSG00000143106ENST00000271308ENST00000477897ENST00000484563ENST00000490870ENST00000491287ENST00000538610
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000734_0001ENSDARG00000003526ENSDART00000020655ENSDARG00000029402ENSDART00000020187ENSDART00000134481ENSDART00000146093CIL_000734_0002ENSG00000134243ENST00000256637ENST00000538502ENSG00000143106ENST00000271308ENST00000484563ENST00000490870ENST00000538610
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003526 ENSDART00000020655 N/A N/A N/A 34.678±11.19 N/A N/A 28.222±8.08 43.105±0.89 2.848±0.00 N/A 31.676±0.00 N/A N/A N/A
ENSDART00000141477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000029402 ENSDART00000020187 N/A N/A N/A N/A N/A N/A 1.657±0.10 N/A 0.204±0.00 N/A 5.207±0.00 N/A N/A N/A
ENSDART00000134481 N/A N/A N/A N/A N/A N/A N/A N/A 0.478±0.00 N/A N/A N/A N/A N/A
ENSDART00000146093 N/A N/A N/A 5.765±3.20 N/A N/A 7.127±0.00 1.907±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134243 ENST00000256637 23.046±0.00 6.165±0.00 N/A 36.273±30.97 12.915±11.65 7.764±3.73 27.521±0.00 31.261±0.00 4.677±0.35 11.227±2.02 32.168±0.00 5.620±2.01 13.689±1.08 24.964±3.11
ENST00000466471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495777 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538502 N/A N/A N/A 7.307±0.00 3.485±0.00 N/A 1.293±0.00 N/A N/A N/A N/A N/A 2.593±0.00 N/A
ENSG00000143106 ENST00000271308 N/A N/A 1.179±0.00 6.573±0.91 N/A 0.633±0.00 N/A 2.370±0.13 1.306±0.69 0.719±0.00 1.075±0.00 1.151±0.44 N/A 0.353±0.00
ENST00000477897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484563 4.392±0.00 3.079±0.00 N/A N/A 3.559±0.00 2.933±0.11 1.483±0.00 3.275±0.00 2.732±0.00 4.242±0.00 2.171±0.95 4.281±1.58 4.284±0.56 5.638±0.59
ENST00000490870 11.732±0.00 13.861±0.00 N/A 5.848±0.75 13.861±0.00 6.760±5.41 7.776±4.95 13.439±7.34 13.383±9.18 11.444±4.41 8.112±3.71 6.072±3.50 22.675±2.74 11.012±9.19
ENST00000491287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538610 N/A N/A 3.553±0.00 N/A 2.124±0.00 N/A N/A 2.531±0.00 N/A N/A N/A 4.208±0.57 N/A 2.069±0.00

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