C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Usher syndrome 2A (autosomal recessive, mild)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000029482 ush2a 7955 - 17:29435964-29830749 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000086201 ush2a-001 29435964-29830749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000086201
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000086201 0.179±0.01 0.015±0.01 0.062±0.00 0.023±0.00 0.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000126 CIL_000126_0001 CGP 17:29404716-29830749
CIL_000127 CIL_000127_0001 CGP 17:29435964-29961297

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0042462 IGI eye photoreceptor cell development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000042781 USH2A Usher syndrome 2A (autosomal recessive, mild) protein_coding Homo_sapiens
ENSMUSG00000026609 Ush2a Usher syndrome 2A (autosomal recessive, mild) protein_coding Mus_musculus

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