C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_000127_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000029482-ENSDARG00000004861 | CGP | 7955 | 17:29435964-29961297  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000004861  (esrrga)estrogen-related receptor gamma a |
ENSDART00000009104 (esrrga-001)
|
29856986-29961297 | protein_coding | |
|
ENSDART00000126966 (esrrga-201)
|
29853913-29961100 | protein_coding | ||
|
ENSDARG00000029482 (ush2a) Usher syndrome 2A (autosomal recessive, mild) |
ENSDART00000086201 (ush2a-001)
|
29435964-29830749 | protein_coding | |
|
ENSDARG00000097219 (si:ch211-214o2.3) si:ch211-214o2.3 |
ENSDART00000154352 (si:ch211-214o2.3-001)
|
29782461-29787853 | antisense | |
|
ENSDARG00000097817 (si:ch211-214o2.2) si:ch211-214o2.2 |
ENSDART00000153865 (si:ch211-214o2.2-001)
|
29781195-29782323 | sense_intronic | |
| CIL_000127_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000042781-ENSG00000196482 | CGP | 9606 | 1:215622894-217137755 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000042781 (USH2A) Usher syndrome 2A (autosomal recessive, mild) |
ENST00000307340 (USH2A-002)
|
215622894-216423396 | protein_coding | |
|
ENST00000366942 (USH2A-001)
|
216173946-216423396 | protein_coding | ||
|
ENST00000366943 (USH2A-201)
|
215622894-216423396 | protein_coding | ||
|
ENST00000463147 (USH2A-004)
|
216083380-216085108 | retained_intron | ||
|
ENST00000481786 (USH2A-003)
|
216083370-216089139 | retained_intron | ||
|
ENSG00000196482 (ESRRG) estrogen-related receptor gamma |
ENST00000359162 (ESRRG-004)
|
216503254-217089605 | protein_coding | |
|
ENST00000360012 (ESRRG-005)
|
216503254-216805367 | protein_coding | ||
|
ENST00000361395 (ESRRG-002)
|
216503254-216939673 | protein_coding | ||
|
ENST00000361525 (ESRRG-201)
|
216503246-217089645 | protein_coding | ||
|
ENST00000366937 (ESRRG-006)
|
216503254-216723453 | protein_coding | ||
|
ENST00000366938 (ESRRG-007)
|
216503254-216939673 | protein_coding | ||
|
ENST00000366940 (ESRRG-003)
|
216503251-217137755 | protein_coding | ||
|
ENST00000391890 (ESRRG-202)
|
216503246-216723472 | protein_coding | ||
|
ENST00000408911 (ESRRG-001)
|
216503254-216723453 | protein_coding | ||
|
ENST00000459825 (ESRRG-020)
|
216865117-217089613 | processed_transcript | ||
|
ENST00000459955 (ESRRG-016)
|
216677312-216723452 | protein_coding | ||
|
ENST00000463665 (ESRRG-011)
|
216505454-217076931 | protein_coding | ||
|
ENST00000469486 (ESRRG-017)
|
216677201-216723416 | protein_coding | ||
|
ENST00000469913 (ESRRG-018)
|
216707420-216723429 | processed_transcript | ||
|
ENST00000471371 (ESRRG-009)
|
216862230-217089636 | processed_transcript | ||
|
ENST00000475275 (ESRRG-008)
|
216519152-216723332 | protein_coding | ||
|
ENST00000477799 (ESRRG-015)
|
216855042-217078360 | processed_transcript | ||
|
ENST00000481543 (ESRRG-019)
|
216677328-216723425 | protein_coding | ||
|
ENST00000487276 (ESRRG-013)
|
216505490-216939670 | protein_coding | ||
|
ENST00000488947 (ESRRG-014)
|
216865061-217090547 | processed_transcript | ||
|
ENST00000493603 (ESRRG-010)
|
216503254-217137754 | protein_coding | ||
|
ENST00000493748 (ESRRG-012)
|
216506788-217076889 | protein_coding | ||
|
ENST00000586199 (ESRRG-023)
|
216567988-217078288 | nonsense_mediated_decay | ||
|
ENST00000616180 (ESRRG-203)
|
216503246-216715253 | protein_coding | ||
|
ENSG00000236292 (RP5-1099E6.3) |
ENST00000420867 (RP5-1099E6.3-001)
|
216194051-216204366 | antisense | |
Expression Patterns
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