C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor CP2-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000029497 tfcp2l1 7955 + 9:39345228-39364059 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000040480 tfcp2l1-002 39345256-39364056 nonsense_mediated_decay
  ENSDART00000111960 tfcp2l1-201 39345437-39363792 protein_coding
  ENSDART00000139888 tfcp2l1-004 39359995-39360879 retained_intron
  ENSDART00000139959 tfcp2l1-003 39345228-39349239 retained_intron
  ENSDART00000146663 tfcp2l1-001 39345256-39364059 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000040480ENSDART00000111960ENSDART00000139959ENSDART00000146663
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000040480 0.114±0.05 2.036±1.85 16.392±11.18 N/A N/A
ENSDART00000111960 0.086±0.00 N/A N/A N/A N/A
ENSDART00000139959 1.344±0.00 0.802±0.00 N/A N/A 1.061±0.00
ENSDART00000146663 0.197±0.00 1.137±0.00 12.475±0.00 20.126±0.00 1.188±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QO CIL_0001QO_0001 CGP 9:39216185-39364059

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000115112 TFCP2L1 transcription factor CP2-like 1 protein_coding Homo_sapiens
ENSMUSG00000026380 Tfcp2l1 transcription factor CP2-like 1 protein_coding Mus_musculus

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