C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transcription factor CP2-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000040480 tfcp2l1-002 ENSDARG00000029497 7955 + 9:39345256-39364056 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000040480
Transcript ID Brain Heart Kidney
ENSDART00000040480 0.114±0.05 2.036±1.85 16.392±11.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QO CIL_0001QO_0001 CGP 9:39216185-39364059

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009885 Ubp1-201 protein_coding Mus_musculus 0 211
ENSMUST00000084885 Ubp1-202 protein_coding Mus_musculus 0 211
ENSMUST00000116492 Ubp1-203 protein_coding Mus_musculus 0 211

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