C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001QO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000010280-ENSDARG00000029497 CGP 7955 9:39216185-39364059
GeneTranscriptPositionBiotype
ENSDARG00000010280 (clasp1a)
cytoplasmic linker associated protein 1a 		ENSDART00000102445 (clasp1a-201) 39220321-39344120 protein_coding
ENSDART00000131334 (clasp1a-002) 39331692-39339097 nonsense_mediated_decay
ENSDART00000137955 (clasp1a-001) 39216185-39344118 protein_coding
ENSDART00000142853 (clasp1a-003) 39325542-39328770 protein_coding
ENSDARG00000029497 (tfcp2l1)
transcription factor CP2-like 1 		ENSDART00000040480 (tfcp2l1-002) 39345256-39364056 nonsense_mediated_decay
ENSDART00000111960 (tfcp2l1-201) 39345437-39363792 protein_coding
ENSDART00000139888 (tfcp2l1-004) 39359995-39360879 retained_intron
ENSDART00000139959 (tfcp2l1-003) 39345228-39349239 retained_intron
ENSDART00000146663 (tfcp2l1-001) 39345256-39364059 protein_coding
CIL_0001QO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000064302-ENSMUSG00000026380 CGP 10090 1:118389058-118685168
GeneTranscriptPositionBiotype
ENSMUSG00000026380 (Tfcp2l1)
transcription factor CP2-like 1 		ENSMUST00000027629 (Tfcp2l1-001) 118627946-118685168 protein_coding
ENSMUST00000190652 (Tfcp2l1-002) 118627945-118637766 processed_transcript
ENSMUSG00000064302 (Clasp1)
CLIP associating protein 1 		ENSMUST00000049404 (Clasp1-201) 118389058-118609432 protein_coding
ENSMUST00000070989 (Clasp1-202) 118389058-118609432 protein_coding
ENSMUST00000165223 (Clasp1-203) 118389058-118609432 protein_coding
ENSMUST00000178710 (Clasp1-204) 118389058-118609432 protein_coding
ENSMUST00000185405 (Clasp1-009) 118389455-118607165 protein_coding
ENSMUST00000186349 (Clasp1-011) 118419560-118608492 protein_coding
ENSMUST00000187575 (Clasp1-015) 118604727-118608205 retained_intron
ENSMUST00000187713 (Clasp1-010) 118389456-118607165 protein_coding
ENSMUST00000188441 (Clasp1-017) 118547211-118547930 retained_intron
ENSMUST00000188710 (Clasp1-013) 118419724-118612678 protein_coding
ENSMUST00000189216 (Clasp1-016) 118510237-118525873 retained_intron
ENSMUST00000189262 (Clasp1-003) 118389455-118608492 protein_coding
ENSMUST00000189384 (Clasp1-014) 118534766-118537490 retained_intron
ENSMUST00000189570 (Clasp1-004) 118389456-118607739 protein_coding
ENSMUST00000189676 (Clasp1-002) 118389344-118503213 retained_intron
ENSMUST00000189738 (Clasp1-007) 118419440-118607739 protein_coding
ENSMUST00000190135 (Clasp1-006) 118389457-118507576 retained_intron
ENSMUST00000190571 (Clasp1-001) 118419724-118608492 protein_coding
ENSMUST00000190733 (Clasp1-008) 118389446-118607165 nonsense_mediated_decay
ENSMUST00000191445 (Clasp1-005) 118389473-118607165 protein_coding
ENSMUSG00000080542 (Gm22710)
predicted gene, 22710 		ENSMUST00000116892 (Gm22710-201) 118459141-118459265 snRNA
ENSMUSG00000100770 (RP24-553C6.2)
predicted gene 28466 		ENSMUST00000190678 (RP24-553C6.2-001) 118478604-118479591 processed_pseudogene
ENSMUSG00000101624 (RP24-236C22.2)
predicted gene 28882 		ENSMUST00000185504 (RP24-236C22.2-001) 118651482-118651795 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QO_0001ENSDARG00000010280ENSDART00000102445ENSDART00000131334ENSDART00000137955ENSDART00000142853ENSDARG00000029497ENSDART00000040480ENSDART00000111960ENSDART00000139888ENSDART00000139959ENSDART00000146663CIL_0001QO_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QO_0001ENSDARG00000010280ENSDART00000102445ENSDART00000137955ENSDARG00000029497ENSDART00000040480ENSDART00000111960ENSDART00000139959ENSDART00000146663CIL_0001QO_0002ENSMUSG00000026380ENSMUST00000027629ENSMUST00000190652ENSMUSG00000064302ENSMUST00000049404ENSMUST00000070989ENSMUST00000165223ENSMUST00000178710ENSMUST00000188710ENSMUST00000189570ENSMUST00000189738ENSMUST00000190733ENSMUST00000191445ENSMUSG00000080542ENSMUST00000116892ENSMUSG00000100770ENSMUST00000190678ENSMUSG00000101624ENSMUST00000185504
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010280 ENSDART00000102445 N/A N/A N/A 4.135±0.00 N/A N/A 2.001±0.45 3.208±0.53 0.185±0.00 N/A N/A N/A N/A N/A
ENSDART00000131334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137955 N/A N/A N/A 3.792±0.00 N/A N/A N/A N/A 0.566±0.00 N/A 1.060±0.00 N/A N/A N/A
ENSDART00000142853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000029497 ENSDART00000040480 N/A N/A N/A 0.114±0.05 N/A N/A 2.036±1.85 16.392±11.18 N/A N/A N/A N/A N/A N/A
ENSDART00000111960 N/A N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139959 N/A N/A N/A 1.344±0.00 N/A N/A 0.802±0.00 N/A N/A N/A 1.061±0.00 N/A N/A N/A
ENSDART00000146663 N/A N/A N/A 0.197±0.00 N/A N/A 1.137±0.00 12.475±0.00 20.126±0.00 N/A 1.188±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026380 ENSMUST00000027629 3.700±3.56 0.174±0.07 2.549±0.13 0.159±0.04 1.480±0.39 47.845±6.83 0.104±0.05 38.977±6.21 1.240±0.61 9.874±0.07 2.672±1.11 3.808±1.48 0.984±0.74 0.970±0.67
ENSMUST00000190652 N/A 0.379±0.16 N/A N/A N/A 69.506±3.71 N/A N/A N/A N/A N/A 8.305±2.33 N/A N/A
ENSMUSG00000064302 ENSMUST00000049404 N/A N/A N/A 9.568±2.35 N/A N/A N/A N/A 0.223±0.00 N/A N/A N/A N/A N/A
ENSMUST00000070989 N/A N/A N/A 6.744±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165223 2.008±0.67 0.998±0.27 4.760±0.83 N/A 2.342±0.88 1.516±0.34 N/A 1.692±0.60 1.358±0.90 2.755±0.32 2.862±0.38 3.012±2.42 3.394±1.56 N/A
ENSMUST00000178710 4.646±1.05 4.729±0.68 3.042±0.61 16.699±0.00 3.999±1.10 3.149±0.40 39.673±3.79 2.202±0.42 1.348±0.54 4.644±0.69 2.366±0.44 6.049±0.71 1.432±0.58 3.932±1.20
ENSMUST00000185405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188710 0.446±0.00 N/A 0.646±0.00 N/A N/A N/A N/A 0.394±0.00 0.319±0.10 0.674±0.00 0.885±0.10 0.761±0.00 0.331±0.00 N/A
ENSMUST00000189216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.258±0.00 4.348±0.00 1.759±0.05 N/A
ENSMUST00000189676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189738 N/A N/A N/A 13.519±0.00 N/A N/A N/A N/A N/A N/A N/A 3.843±0.35 2.626±1.01 5.301±0.00
ENSMUST00000190135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.892±1.56
ENSMUST00000191445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.485±0.47
ENSMUSG00000080542 ENSMUST00000116892 1418.707±152.37 1571.290±0.00 13.446±0.00 50.761±0.00 N/A N/A N/A N/A 21.543±15.20 N/A N/A N/A 101.175±76.53 N/A
ENSMUSG00000100770 ENSMUST00000190678 0.176±0.07 0.387±0.18 0.062±0.00 0.361±0.00 0.498±0.07 0.183±0.00 0.298±0.10 0.127±0.09 0.128±0.06 0.116±0.02 N/A 0.438±0.28 0.066±0.00 0.163±0.09
ENSMUSG00000101624 ENSMUST00000185504 0.598±0.00 N/A 0.054±0.00 N/A N/A 0.380±0.03 N/A 0.501±0.19 N/A 0.510±0.01 N/A 0.700±0.00 0.061±0.00 N/A

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