C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor CP2-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026380 Tfcp2l1 10090 + 1:118627945-118685168 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027629 Tfcp2l1-001 118627946-118685168 protein_coding
  ENSMUST00000190652 Tfcp2l1-002 118627945-118637766 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027629ENSMUST00000190652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027629 3.700±3.56 0.174±0.07 2.549±0.13 0.159±0.04 1.480±0.39 47.845±6.83 0.104±0.05 38.977±6.21 1.240±0.61 9.874±0.07 2.672±1.11 3.808±1.48 0.984±0.74 0.970±0.67
ENSMUST00000190652 N/A 0.379±0.16 N/A N/A N/A 69.506±3.71 N/A N/A N/A N/A N/A 8.305±2.33 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QO CIL_0001QO_0002 CGP 1:118389058-118685168
CIL_0007TZ CIL_0007TZ_0002 VISTA 1:118476526-119078049

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000902 IMP cell morphogenesis
GO:0002070 IMP epithelial cell maturation
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 ISA transcription factor complex
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007028 IMP cytoplasm organization
GO:0007431 IMP salivary gland development
GO:0008340 IMP determination of adult lifespan
GO:0016020 IDA membrane
GO:0045927 IMP positive regulation of growth

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029497 tfcp2l1 transcription factor CP2-like 1 protein_coding Danio_rerio
ENSG00000115112 TFCP2L1 transcription factor CP2-like 1 protein_coding Homo_sapiens

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