C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DNA (cytosine-5-)-methyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000030756 dnmt1 7955 - 3:55442890-55458859 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000021977 dnmt1-001 55442890-55458838 protein_coding
  ENSDART00000078973 dnmt1-201 55442890-55458838 protein_coding
  ENSDART00000128041 dnmt1-202 55442890-55458859 protein_coding

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000021977ENSDART00000128041
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000021977 7.499±1.75 2.201±0.54 51.625±0.00 1.505±0.00 1.125±0.00
ENSDART00000128041 N/A 1.313±0.00 6.533±2.25 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BQ CIL_0004BQ_0001 CGP 3:55433659-55458859
CIL_000773 CIL_000773_0001 CGP 3:55442890-55469588

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002088 IMP lens development in camera-type eye
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003886 IEA DNA (cytosine-5-)-methyltransferase activity
GO:0005634 IEA nucleus
GO:0006306 IEA DNA methylation
GO:0008134 IEA transcription factor binding
GO:0008168 IEA methyltransferase activity
GO:0008270 IEA zinc ion binding
GO:0010842 IMP retina layer formation
GO:0016740 IEA transferase activity
GO:0031017 IMP exocrine pancreas development
GO:0032259 IEA methylation
GO:0032776 IMP DNA methylation on cytosine
GO:0035622 IMP intrahepatic bile duct development
GO:0044030 IMP regulation of DNA methylation
GO:0048565 IMP digestive tract development
GO:0051216 IMP cartilage development
GO:0051567 IMP histone H3-K9 methylation
GO:0060042 IMP retina morphogenesis in camera-type eye
GO:0090116 IEA C-5 methylation of cytosine

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000130816 DNMT1 DNA (cytosine-5-)-methyltransferase 1 protein_coding Homo_sapiens
ENSMUSG00000004099 Dnmt1 DNA methyltransferase (cytosine-5) 1 protein_coding Mus_musculus

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