C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protocadherin 11 Y-linked
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000033556 PCDH11Y 7955 - 14:28321632-28337327 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000113461 PCDH11Y-201 28321632-28337327 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000113461
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000113461 9.839±3.86 0.113±0.09 0.563±0.17 0.052±0.00 0.520±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007156 IEA homophilic cell adhesion
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000099715 PCDH11Y protocadherin 11 Y-linked protein_coding Homo_sapiens
ENSG00000102290 PCDH11X protocadherin 11 X-linked protein_coding Homo_sapiens
ENSG00000279279 PCDH11Y protein_coding Homo_sapiens
ENSG00000279870 PCDH11Y protein_coding Homo_sapiens
ENSG00000280342 PCDH11Y protocadherin 11 Y-linked protein_coding Homo_sapiens
ENSMUSG00000034755 Pcdh11x protocadherin 11 X-linked protein_coding Mus_musculus

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